A novel marine nitrite-oxidizing Nitrospira species from Dutch coastal North Sea water.

Haaijer SC, Ji K, van Niftrik L, Hoischen A, Speth D, Jetten MS, Damsté JS, Op den Camp HJ

Front Microbiol. 2013. doi: 10.3389/fmicb.2013.00060

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Metagenomic insights into the dominant Fe(II) oxidizing Zetaproteobacteria from an iron mat at Lō´ihi, Hawai´l.

Singer E, Heidelberg JF, Dhillon A, Edwards KJ

Front Microbiol. 2013. doi: 10.3389/fmicb.2013.00052

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The structure of microbial community and degradation of diatoms in the deep near-bottom layer of Lake Baikal.

Zakharova YR, Galachyants YP, Kurilkina MI, Likhoshvay AV, Petrova DP, Shishlyannikov SM, Ravin NV, Mardanov AV, Beletsky AV, Likhoshway YV

PLoS One. 2013. doi: 10.1371/journal.pone.0059977

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Defining the functional potential and active community members of a sediment microbial community in a high-arctic hypersaline subzero spring.

Lay CY, Mykytczuk NC, Yergeau É, Lamarche-Gagnon G, Greer CW, Whyte LG

Appl Environ Microbiol. Jun 2013. doi: 10.1128/AEM.00153-13

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Metagenomic analysis of methanogen populations in three full-scale mesophilic anaerobic manure digesters operated on dairy farms in Vermont, USA.

St-Pierre B, Wright AD

Bioresour Technol. Jun 2013. doi: 10.1016/j.biortech.2013.03.188S0960-8524(13)00592-0

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Metagenomic identification of bacterioplankton taxa and pathways involved in microcystin degradation in lake erie.

Mou X, Lu X, Jacob J, Sun S, Heath R

PLoS One. 2013. doi: 10.1371/journal.pone.0061890

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Taxonomic profiling and metagenome analysis of a microbial community from a habitat contaminated with industrial discharges.

Shah V, Zakrzewski M, Wibberg D, Eikmeyer F, Schlüter A, Madamwar D

Microb Ecol. Oct 2013. doi: 10.1007/s00248-013-0244-x

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Comparative genomics of two 'Candidatus Accumulibacter' clades performing biological phosphorus removal.

Flowers JJ, He S, Malfatti S, del Rio TG, Tringe SG, Hugenholtz P, McMahon KD

ISME J. Dec 2013. doi: 10.1038/ismej.2013.117

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Biodegradation of naphthenic acids in oils sands process waters in an immobilized soil/sediment bioreactor.

McKenzie N, Yue S, Liu X, Ramsay BA, Ramsay JA

Chemosphere. Aug 2014. doi: 10.1016/j.chemosphere.2014.02.001S0045-6535(14)00178-7

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Microbial community and potential functional gene diversity involved in anaerobic hydrocarbon degradation and methanogenesis in an oil sands tailings pond.

An D, Brown D, Chatterjee I, Dong X, Ramos-Padron E, Wilson S, Bordenave S, Caffrey SM, Gieg LM, Sensen CW, Voordouw G

Genome. Oct 2013. doi: 10.1139/gen-2013-0083

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Comparative metagenomics of anode-associated microbiomes developed in rice paddy-field microbial fuel cells.

Kouzuma A, Kasai T, Nakagawa G, Yamamuro A, Abe T, Watanabe K

PLoS One. 2013. doi: 10.1371/journal.pone.0077443

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Comparative metagenomic analysis of bacterial populations in three full-scale mesophilic anaerobic manure digesters.

St-Pierre B, Wright AD

Appl Microbiol Biotechnol. Mar 2014. doi: 10.1007/s00253-013-5220-3

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Analysis of bacterial xylose isomerase gene diversity using gene-targeted metagenomics.

Nurdiani D, Ito M, Maruyama T, Terahara T, Mori T, Ugawa S, Takeyama H

J Biosci Bioeng. Feb 2015

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Metagenomic insights into Cr(VI) effect on microbial communities and functional genes of an expanded granular sludge bed reactor treating high-nitrate wastewater.

Miao Y, Liao R, Zhang XX, Wang Y, Wang Z, Shi P, Liu B, Li A

Water Res. Jun 2015. doi: 10.1016/j.watres.2015.02.042S0043-1354(15)00115-3

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Biofouling and Microbial Communities in Membrane Distillation and Reverse Osmosis.

Zodrow KR, Bar-Zeev E, Giannetto MJ, Elimelech M.

Environ Sci Technol. 2014 Nov 18;48(22):13155-64. doi: 10.1021/es503051t. Epub 2014 Oct 31.

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Anodic and cathodic microbial communities in single chamber microbial fuel cells.

Anodic and cathodic microbial communities in single chamber microbial fuel cells.

N Biotechnol. 2015 Jan 25;32(1):79-84. doi: 10.1016/j.nbt.2014.09.005. Epub 2014 Oct 5.

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A metagenomic study of the microbial communities in four parallel biogas reactors.

Solli L1, Håvelsrud OE2, Horn SJ3, Rike AG4.

Biotechnol Biofuels. 2014 Oct 14;7(1):146. doi: 10.1186/s13068-014-0146-2. eCollection 2014.

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Polyketide synthases in the microbiome of the marine sponge Plakortis halichondrioides: a metagenomic update.

Della Sala G, Hochmuth T, Teta R, Costantino V, Mangoni A

Mar Drugs. Nov 2014. doi: 10.3390/md12115425

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Metaphylogenomic and Potential Functionality of the Limpet Patella pellucida's Gastrointestinal Tract Microbiome.

Dudek M1, Adams J2, Swain M3, Hegarty M4, Huws S5, Gallagher J6.

Int J Mol Sci. 2014 Oct 20;15(10):18819-39. doi: 10.3390/ijms151018819.

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Microbial community analysis of a full-scale DEMON bioreactor.

Gonzalez-Martinez A1, Rodriguez-Sanchez A, Muñoz-Palazon B, Garcia-Ruiz MJ, Osorio F, van Loosdrecht MC, Gonzalez-Lopez J. Bioprocess Biosyst Eng. 2015 Mar;38(3):499-508. doi: 10.1007/s00449-014-1289-z. Epub 2014...

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Insect gut microbiome - An unexploited reserve for biotechnological application.

Krishnan M1, Bharathiraja C1, Pandiarajan J1, Prasanna VA1, Rajendhran J2, Gunasekaran P2.

Asian Pac J Trop Biomed. 2014 May;4(Suppl 1):S16-21. doi: 10.12980/APJTB.4.2014C95.

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Metagenomic analysis of the sludge microbial community in a lab-scale denitrifying phosphorus removal reactor.

Lv XM, Shao MF, Li J, Li CL

Appl Biochem Biotechnol. Apr 2015. doi: 10.1007/s12010-015-1491-8

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Metagenomic evidence for metabolism of trace atmospheric gases by high-elevation desert Actinobacteria.

Lynch RC, Darcy JL, Kane NC, Nemergut DR, Schmidt SK

Front Microbiol. 2014. doi: 10.3389/fmicb.2014.00698

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Recovering glycoside hydrolase genes from active tundra cellulolytic bacteria.

Pinnell LJ, Dunford E, Ronan P, Hausner M, Neufeld JD

Can J Microbiol. Jul 2014. doi: 10.1139/cjm-2014-0193

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Exploring the sheep rumen microbiome for carbohydrate-active enzymes.

Lopes LD, de Souza Lima AO, Taketani RG, Darias P, da Silva LR, Romagnoli EM, Louvandini H, Abdalla AL, Mendes R

Antonie Van Leeuwenhoek. Apr 2015

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