Effects of amoxicillin treatment on the salivary microbiota in children with acute otitis media.

Lazarevic V, Manzano S, Gaïa N, Girard M, Whiteson K, Hibbs J, François P, Gervaix A, Schrenzel J

Clin Microbiol Infect. Aug 2013. doi: 10.1111/1469-0691.12213

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Intestinal dysbiosis and depletion of butyrogenic bacteria in Clostridium difficile infection and nosocomial diarrhea.

Antharam VC, Li EC, Ishmael A, Sharma A, Mai V, Rand KH, Wang GP

J Clin Microbiol. Sep 2013. doi: 10.1128/JCM.00845-13

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Single clinical isolates from acute uncomplicated urinary tract infections are representative of dominant in situ populations.

Willner D, Low S, Steen JA, George N, Nimmo GR, Schembri MA, Hugenholtz P

MBio. 2014. doi: 10.1128/mBio.01064-13e01064-13

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Gut microbiome perturbations induced by bacterial infection affect arsenic biotransformation.

Lu K, Cable PH, Abo RP, Ru H, Graffam ME, Schlieper KA, Parry NM, Levine S, Bodnar WM, Wishnok JS, Styblo M, Swenberg JA, Fox JG, Tannenbaum SR

Chem Res Toxicol. Dec 2013. doi: 10.1021/tx4002868

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Decreased microbiota diversity associated with urinary tract infection in a trial of bacterial interference.

Horwitz D, McCue T, Mapes AC, Ajami NJ, Petrosino JF, Ramig RF, Trautner BW

J Infect. Jun 2015

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Complexity, temporal stability, and clinical correlates of airway bacterial community composition in primary ciliary dyskinesia.

Rogers GB, Carroll MP, Zain NM, Bruce KD, Lock K, Walker W, Jones G, Daniels TW, Lucas JS

J Clin Microbiol. Dec 2013. doi: 10.1128/JCM.02164-13

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Structural and functional changes in the gut microbiota associated to Clostridium difficile infection.

Pérez-Cobas AE, Artacho A, Ott SJ, Moya A, Gosalbes MJ, Latorre A

Front Microbiol. 2014. doi: 10.3389/fmicb.2014.00335

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The bacteriome-mycobiome interaction and antifungal host defense

Ten Oever J1, Netea MG.

Eur J Immunol. 2014 Nov;44(11):3182-91. doi: 10.1002/eji.201344405. Epub 2014 Oct 27.

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Highly Diverse Microbiota in Dental Root Canals in Cases of Apical Periodontitis (Data of Illumina Sequencing)

Vengerfeldt V1, Spilka K2, Saag M1, Preem JK3, Oopkaup K3, Truu J3, Mändar R4.

J Endod. 2014 Nov;40(11):1778-83. doi: 10.1016/j.joen.2014.06.017. Epub 2014 Sep 16.

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Recent progress in understanding the epidemiology of bacterial vaginosis.

Kenyon CR1, Osbak K.

Curr Opin Obstet Gynecol. 2014 Dec;26(6):448-54. doi: 10.1097/GCO.0000000000000112.

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Rapid metagenomic diagnostics for suspected outbreak of severe pneumonia.

Fischer N, Rohde H, Indenbirken D, Günther T, Reumann K, Lütgehetmann M, Meyer T, Kluge S, Aepfelbacher M, Alawi M, Grundhoff A

Emerg Infect Dis. Jun 2014. doi: 10.3201/eid2006.131526

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Altered faecal and mucosal microbial composition in post-infectious irritable bowel syndrome patients correlates with mucosal lymphocyte phenotypes and psychological distress.

Sundin J, Rangel I, Fuentes S, Heikamp-de Jong I, Hultgren-Hörnquist E, de Vos WM, Brummer RJ

Aliment Pharmacol Ther. Dec 2014. doi: 10.1111/apt.13055

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Metagenomic analysis of the impact of nitrofurantoin treatment on the human faecal microbiota.

Vervoort J, Xavier BB, Stewardson A, Coenen S, Godycki-Cwirko M, Adriaenssens N, Kowalczyk A, Lammens C, Harbarth S, Goossens H, Malhotra-Kumar S

J Antimicrob Chemother. Mar 2015

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16S rRNA gene-based metagenomic analysis identifies a novel bacterial co-prevalence pattern in dental caries.

Jagathrakshakan SN, Sethumadhava RJ, Mehta DT, Ramanathan A

Eur J Dent. . doi: 10.4103/1305-7456.149661

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